calculate_mcc is used to calculate the MCC score given the SNP profile.

calculate_mcc(pattern, goi, MUST_HAVE_TARGET = TRUE)

Arguments

pattern

the SNP profile for each samples

goi

the samples belonging to the group of interest

MUST_HAVE_TARGET

whether to force the profile to have at least 1 target profile (the profile containing the most goi)

Value

the MCC score