combine_fastq_search_result — combine_fastq_search

combine_fastq_search_result combines the search results from search_from_fastq_reads

combine_fastq_search_result(
  results,
  search_table,
  previous_result = NULL,
  bp = MulticoreParam()
)

Arguments

results: the result (fastq_search_result) from search_from_fastq_reads to combine.
search_table: a dataframe with the following columns: - "id","type","sequence","strand","result","extra","match_ref_seq"
previous_result: the result (fastq_search_result) to append to
bp: BiocParallel backend to use for parallelization

Value

will return a dataframe containing: - `sequence`, `search_id`, `reads`, `raw_match`, `mean_qualities`, `indexes`, `id`, `type`, `strand`, `result`, `extra`, `match_ref_seq`, `n_reads`