iterate_merge — iterate_merge • minSNPs

iterate_merge is used to combine > 2 fastas iteratively.

iterate_merge(
  fastas,
  metas,
  ref,
  method = "full",
  bp = BiocParallel::SerialParam(),
  ...
)

Arguments

fastas: list of fastas read into memory to join
metas: list of metas read into memory to join
ref: name of the reference genome (needs to be in both fasta files)
method: how to join the 2 fasta, currently supported methods are: inner, full
bp: the BiocParallel backend
...: all other arguments

Will return a list containing a merged FASTA and a meta.